Preview

Nephrology (Saint-Petersburg)

Advanced search

Does the urine microbiota of healthy women vary during daytime?

Abstract

THE AIM: to study the urine microbiota of healthy women during daytime. PATIENTS AND METHODS. We performed bacteriological examination of urine samples from 20 healthy sexually active women taken at different time (at 8:00, 12:00, and 16:00). Examination of the urine was performed using an extended set of culture media for facultative anaerobic and non-clostridial anaerobic bacteria. 10 culture media were used. HiAnaerobic System - Mark VI or AnaeroHiGas Pak were used to create anaerobic conditions. Calculations were performed in R software environment for statistical computing and graphics. RESULTS. Bacteriological examination of 60 urine specimens revealed no sterile samples. In the facultative anaerobic bacteria group, coagulase-negative staphylococci and Corynebacterium spp. were detected with high frequency (>60,0%) throughout the day. In the nonclostridial anaerobic bacteria group, Eubacterium spp., Peptococcus spp., Propionibacterium spp., and Lactobacillus spp. demonstrated stable association. Bacteriuria level for all microorganisms verified in the urine of healthy women in the overwhelming majority of cases was <103 CFU/ml. Cochran’s test established the absence of significant variations in the detection frequency of different bacterial genera during the day. Except for 3 genera, no significant differences in the bacteriuria levels were revealed. Dendrograms indicate high level of similarity between the presence frequency and concentration of microorganisms at different points in time. CONCLUSION. Typical spectrum of the urine is identified in healthy women irrespectively of the time of the day.

About the Authors

Yu. L. Naboka
Rostov State Medical University
Russian Federation


M. I. Kogan
Rostov State Medical University
Russian Federation


I. A. Gudima
Rostov State Medical University
Russian Federation


S. A. Zarutskiy
Rostov State Medical University
Russian Federation


K. T. Jalagonia
Rostov State Medical University
Russian Federation


References

1. Воробьев АА. Медицинская микробиология, вирусология и иммунология. МИА, М., 2004; 690

2. Osborne NG. Acute urinary-tract infection: a condition over-diagnosed in women? J of Gynecologic Surgery 2008;24(1):51-54

3. Коган МИ, Набока ЮЛ, Гудима ИА и др. Микробный спектр мочи молодых здоровых женщин. Урология 2010;5:7-10

4. Naboca JL, Kogan MI, Gudima IA et al. Harnflora bei gesunden frauen. ArchivEuroMedica 2011;1-2:155-157

5. Siddiqui H, Nederbragt AJ, Lagesen K et al. Assesing diversity of the female urine microbiota by high throughput sequencing of 16S RNA amplicons. BMC Microbiol 2011;11:244-251

6. Fouts DE, Pieper R, Szpakowski S et al. Integrated next-generation sequencing of 16S rDNA and metaproteomics differentiate the healthy urine microbiome from asymptomatic bacteriuria in neuropathic bladder associated with spinal cord injury. J Transl

7. Wolfe AJ, Toh E, Shibata N et al. Evidence of uncultivated bacteria in the adult female bladder. J Clin Microbiol 2012; 50(4):1376-1383

8. Клинические рекомендации. Европейская ассоциация урологов. 2015 [Klinicheskie rekomendatsii. Evropeyskaya assotsiatsiya urologov. 2015]

9. Методические указания МУ 4.2.2039-05. Техника сбора и транспортирования биоматериалов в микробиологические лаборатории, М., 2006; 43-59

10. Wolfe AJ, Brubaker L. «Sterile urine» and the presence of bacteria. Eur Urol 2015;68:173-174

11. Hilt EE, McKinley K, Pearce MM et al. Urine is not sterile: use of enhanced urine culture techniques to detect resident bacterial flora in the adult female bladder. J Clin Microbiol 2014;52(3):871-876

12. Pearce MM, Hilt EE, Rosenfeld AB et al. The female urinary microbiome: a comparison of women with and without urgency urinary incontinence. Mbio 2014;5(4):є01283-14


Review

For citations:


Naboka Yu.L., Kogan M.I., Gudima I.A., Zarutskiy S.A., Jalagonia K.T. Does the urine microbiota of healthy women vary during daytime? Nephrology (Saint-Petersburg). 2016;20(5):36-42. (In Russ.)

Views: 693


ISSN 1561-6274 (Print)
ISSN 2541-9439 (Online)